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Publications

Rangarajan, A.A. and K. Schnetz (2018)
Interference of transcription across H-NS binding sites and repression by H-NS.
Mol. Microbiol. 108(3): 226-239.

Breddermann, H. & K. Schnetz (2017)
Activation of leuO by LrhA in Escherichia coli.
Mol. Microbiol. 104, 664-676

Breddermann, H. & K. Schnetz (2016)
Correlation of Antagonistic Regulation of leuO Transcription with the Cellular Levels of BglJ-RcsB and LeuO in Escherichia coli.
Front. Cell. Infect. Microbiol. 6.

Pannen, D., M. Fabisch, L. Gausling & K. Schnetz (2016)
Interaction of the RcsB response regulator with auxiliary transcription regulators in Escherichia coli.
J. Biol. Chem. 291: 2357-2370.

Westermayer, S. A., G. Fritz, J. Gutiérrez, J. A. Megerle, M. P. S. Weißl, K. Schnetz, U. Gerland and J. O. Rädler (2016)
Single-cell characterization of metabolic switching in the sugar phosphotransferase system of Escherichia coli.
Mol. Microbiol. 100: 472-485.

Mader, A., B. von Bronk, B. Ewald, S. Kesel, K. Schnetz, E. Frey & M. Opitz, (2015)
Amount of Colicin release in Escherichia coli is regulated by lysis gene expression of the Colicin E2 operon.
PLoS ONE 10: e0119124.

Wiebe, H., D. Gürlebeck, J. Groß, K. Dreck, D. Pannen, C. Ewers, L. H. Wieler & K. Schnetz (2015)
YjjQ represses transcription of flhDC and additional loci in Escherichia coli.
J. Bacteriol. 197: 2713-2720.

Salscheider, S. L., A. Jahn and K. Schnetz (2014)
Transcriptional regulation by BglJ–RcsB, a pleiotropic heteromeric activator in Escherichia coli.
Nucleic Acids Res. 42: 2999-3008.

Arslan, Z., Stratmann, T., Wurm, R., Wagner, R., Schnetz, K., and Pul, Ü. (2013).
RcsB-BglJ-mediated activation of Cascade operon does not induce the maturation of CRISPR RNAs in E. coli K12.
RNA Biology 10, 708–715.

Stratmann, T., Pul, Ü., Wurm, R., Wagner, R., and Schnetz, K. (2012).
RcsB-BglJ activates the Escherichia coli leuO gene, encoding an H-NS antagonist and pleiotropic regulator of virulence determinants.
Mol Microbiol 83, 1109–1123.

Kavalchuk, K., Madhusudan, S., and Schnetz, K. (2012). PDF-file supplement
RNase III initiates rapid degradation of proU mRNA upon hypo-osmotic stress in Escherichia coli.
RNA Biology 9, 98-109.

Perfeito, L., Ghozzi, S., Berg, J., Schnetz, K., and Lässig, M. (2011)
Nonlinear Fitness Landscape of a Molecular Pathway.
PLoS Genet 7, e1002160.

Venkatesh G.R., Kembou Koungni F.C., Paukner A., Stratmann T., Blissenbach B., and Schnetz K. (2010)
BglJ-RcsB heterodimers relieve repression of the Escherichia coli bgl operon by H-NS.
J. Bacteriol. 192, 6456-6464

Westra, E.R., Pul, U., Heidrich, N., Jore, M.M., Lundgren, M., Stratmann, T., Wurm, R., Raine, A., Mescher, M., van Heereveld L., Mastop, M., Wagner, E. G., Schnetz, K., van der Oost, J., Wagner, R., and Brouns, S. J. (2010)
H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO.
Mol Microbiol 77, 1380-1393.

Neelakanta G., Sankar S.T., and Schnetz K. (2009)
Characterization of a β-glucoside operon (bgc) prevalent in septicemic and uropathogenic Escherichia coli.
Appl. Environ. Microbiol. 75,2284-2293.

Sankar S.T., Neelakanta G., Sangal V., Plum G., Achtman M., and Schnetz K. (2009)
Fate of the H-NS repressed bgl operon in evolution of Escherichia coli.
PLoS Genetics 5:e1000405.

Schnetz K. (2008)
Fine-tuned growth phase control of dps, encoding a DNA protection protein, by FIS and H-NS.
Mol. Microbiol. 68(6):1345-1347. Epub 2008 Apr 21.

Li G., Ewers C., Laturnus C., Diehl I., Alt K., Dai J., Antao E.M., Schnetz K., Wieler L.H. (2008)
Characterization of a yjjQ mutant of avian pathogenic Escherichia coli (APEC).
Microbiology 154:1082-1093.

Radde N., Gebert J., Faigle U., Schrader R., and Schnetz K. (2008)
Modeling feedback loops in the H-NS mediated regulation of the Escherichia coli bgl operon.
J. Theor. Biol. 250(2):298-306. Epub 2007 Nov 5. doi:10.1016/j.jtbi.2007.09.033.

Stratmann T., Madhusudan S., and Schnetz K. (2008)
Regulation of the yjjQ-bglJ operon encoding LuxR-type transcription factors and the divergent yjjP gene by H-NS and LeuO.
J. Bacteriol., 190(3):926-935. Epub 2007 Nov 30.

Nagarajavel V., Madhusudan S., Dole S., Rahmouni A.R., and Schnetz K. (2007)
Repression by binding of H-NS within the transcription unit.
J. Biol. Chem. 282 (32):23622-23630, 2007.

Wolf, T., Janzen, W., Blum, C. and Schnetz, K. (2006)
Differential dependence of StpA on H-NS in auto-regulation of stpA and in regulation of bgl.
J. Bacteriol 188 (19): 6728-6838.

Madhusudan, S., Paukner, A., Klingen, Y. and Schnetz, K. (2005)
Independent regulation of H-NS-mediated silencing of the bgl operon at two levels: upstream by BglJ and LeuO and downstream by DnaKJ.
Microbiology 151: 3349-3359.

Dole, S., Klingen, Y., Nagarajavel, V., and Schnetz, K. (2004)
The protease Lon and the RNA-binding protein Hfq reduce silencing of the E.coli bgl operon by H-NS.
J. Bact. 186, 2708-2716.

Dole, S., Nagarajavel, V., and Schnetz, K. (2004)
The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter.
Mol. Microbiol. 52, 589-600.

Schnetz, K. (2002)
Silencing of the Escherichia coli bgl operon by RpoS requires Crl.
Microbiology 148, 2573-2578.

Dole, S., Kühn, S., and Schnetz, K. (2002)
Post-transcriptional enhancement of Escherichia coli bgl operon silencing by limitation of BglG-mediated antitermination at low transcription rates.
Mol. Microbiol. 43, 217-226.

Caramel, A. and Schnetz, K. (2000)
Antagonistic control of the E. coli bgl promoter by FIS and CAP in vitro.
Mol. Microbiol. 36, 85-92.

Caramel, A. and Schnetz, K. (1998)
Lac and Lambda repressor relieve silencing of the Escherichia coli bgl promoter. Activation by alteration of a repressing nucleoprotein complex.
J. Mol. Biol. 284, 875-883.

Schnetz, K. and Wang, J.C. (1996)
Silencing of the Escherichia coli bgl promoter: Effects of template supercoiling and cell extracts on promoter activity in vitro.
Nucleic. Acids. Res. 24, 2422-2429.

Koch, S., Sutrina, S.L., Wu, L.-F., Reizer, J., Schnetz, K., Rak, B., and Saier, M.H., Jr. (1996)
Identification of a site in the phosphocarrier protein, HPr, which influences its interactions with sugar permeases of the bacterial phosphotransferase system: kinetic analyses employing site-specific mutants.
J. Bacteriol. 178, 1126-1133.

Schnetz, K., Stülke, J., Gertz, S., Krüger, S., Krieg, M., Hecker, M., and Rak, B. (1996)
LicT, a Bacillus subtilis transcriptional antiterminator protein of the BglG family.
J. Bacteriol. 178, 1971-1979.

Schnetz, K. (1995)
Silencing of Escherichia coli bgl promoter by flanking sequence elements.
EMBO J. 14, 2545-2550.  

 

Ph.D. Thesis

Hannes Breddermann (2016) Transcription control of the pleiotropic regulator and H-NS antagonist LeuO in Escherichia coli
Derk Pannen (2015) Analysis of transcriptional regulation by RcsB homo- and heterodimers in Escherichia coli
Katrin Dreck (2013) Functional characterization of the transcription factor YjjQ in Escherichia coli
Thomas Stratmann (2012) Transcriptional control of the H-NS antagonists LeuO and RcsB-BglJ in Escherichia coli
Kanstantsin Kavalchuk (2011) Osmoregulation of the proU operon at a post-transcriptional level in Escherichia coli
Raja Venkatesh G. (2010) The Analysis of the interaction of LuxR-type transcription factors BglJ and RcsB in Escherichia coli
Sabari Sankar Thirupathy (2008) The evolution of silent β,D-glucoside systems in Escherichia coli
Madhusudan S. (2007) The mechanism and modulation of H-NS mediated repression in Escherichia coli
Andreas Paukner (2007) Ein Regulationsnetzwerk aus H-NS und den Antireperessoren BglJ und LeuO
Nagarajavel V. (2007) H-NS mediated repression of the E.coli bgl and proU operons
Neelakanta, Girish (2005) Genome variations in commensal and pathogenic E.coli
Dole, Sudhanshu (2001) Multiple level regulation of the Escherichia coli bgl operon
Caramel, Angela (1999) On the activation and regulation of the silent Escherichia coli bgl promoter

Master Thesis

Yilmaz, Cihan (2016) The cellular function and localization of the cyclic-di-GMP phosphodiesterase YahA
Wiebe, Helene (2013) Characterization of the transcription factor YjjQ in Escherichia coli
Filipova, Diljana (2013) Analysis of the co- and post-transcriptional regulation of the yjjQ-bglJ operon in Escherichia coli K-12
Groß, Jana (2013) Transcriptional regulation by YjjQ

Diploma Thesis

Schubert, Susann Marlies (2013) Modulation of the activity of LeuO, a transcriptional regulator in Escherichia coli
Kretschmer, Andreas (2010) Wechselbeziehung zwischen Transkription und Repression durch die Nucleoid-assoziierten Proteine H-NS und StpA
Bouchara, Idriss (2009) Zur Transkriptionsregulation durch den globalen Regulator H-NS in Escherichia coli
Blissenbach, Birgit (2008) Antagonistische Regulation des yjjP-yjjQ-bglJ-Locus durch H-NS und den Transkriptionsfaktor LeuO
Fabisch, Maria (2008) Wechselwirkung von Transkriptionsfaktoren des LuxR-Typs in Escherichia coli
Kembou Kougni, Frant Carlot (2007) Interaktion der Transkriptionsfaktoren BglJ und YjjQ von Escherichia coli mit RcsB
Kakanj, Parisa (2005) Die Regulation des bgl-Operons von E.coli durch Hfq
Wolf, Tinka (2004) Zur Funktion der homologen Proteine H-NS und StpA in E.coli
Thiemann, Markus (2003) Zur Autoregulation des Antiterminators BglG von E.coli
Klingen, Yvonne (2001) Zur Rolle der Protease Lon im Silencing des E.coli bgl Operons
Borsos, Karolj (2000) Zur Regulation des bgl Promotors durch FIS

Bachelor Thesis

Lennart, Robers (2015) The role of Rho in co- and posttranscriptional regulation of the yjjQ-bglJ operon in E. coli
Yilmaz, Cihan (2014) Transcriptional regulation of yahA and the effect of the cyclic-di-GMP phosphodiesterase YahA on the osmoregulation of proU
Stadelmayer Frank (2014) Die Rolle der 5‘-untranslatierten Region bei der Regulation des yjjQ-bglJ Operons in Escherichia coli K-12
Doherr, Sandra (2013) Co- and post-transcriptional regulation of the yjjQ-bglJ operon in Escherichia coli K-12
Jahn, Andreas (2013) Analyse des Genregulatorproteins RcsB-BglJ als Klasse I Aktivator in Escherichia coli
Salscheider, Silja Lucia (2012) Analyse der Transkriptionsregulation spezifischer Zielgene durch RcsB-BglJ in Escherichia coli
Schwarzer, Robin (2011) Untersuchungen über den positiven feedback-loop der Transkriptionsfaktoren BglJ und LeuO in Escherichia coli
Basfeld, Alrun (2011) Analyse synthetischer H-NS Bindestellen und eines Promotorsystems in Escherichia coli
Öztürk, Selman (2010) Homo- und Heterodimerisierung des Transkriptionsfaktors RcsB in E. coli
Scholz, Paul (2009) Regulation des leuO Locus in Escherichia coli
Antunes, Andre (2008) Role of the small regulatory RNA SgrS in regulation of the Escherichia coli bgl operon
Muhr, Merlin (2008) Analysis of repression by binding of H-NS within the transcription unit
Klemme, Sonja (2007) Kartierung der Interaktionsdomänen der LuxR-Typ Transkriptionsfaktoren RcsA, RcsB, YjjQ and BglJ in Escherichia coli
Moll, Lorna (2006) Zur Regulation des yjjP-yjjQ-bglJ Locus von Escherichia coli durch H-NS und LeuO

Staatsexamen

Pannen, Derk (2011) Analyse der Homo- und Heterodimerisierung des Transkriptionsfaktors RcsB in Escherichia coli
Stratmann, Thomas (2007) Regulation des yjjP-yjjQ-bglJ-Locus von Escherichia coli durch H-NS und LeuO
Blum, Corinna (2005) Analyse von Mutanten des Histon-ähnlichen Proteins H-NS
Janzen, Wiebke (2005) Regulation des stpA-Gens und Wechselwirkung mit dem Histon-ähnlichen Protein H-NS
Nix, Annette (2001) Zur Regulation des bgl Operons von Escherichia coli: Aktiviert das Antiterminatorprotein BglG die Translation seiner mRNA?